Remove programs after a sprite restore?

[thezero4]

I've searched a bit and couldn't find this. I updated my ROM (everything went fine) I then tried to restore with Sprite backup (I wasn't really expecting it to work) good news it did work using the Safe mode restore. There were a few issues like No2Chem 1% battery hack and a few other minor ones. I fixed them now by reinstalling, this brings me to my question though I can't un-install anything that sprite restored they don't show in my remove programs list. I was curious if there's a program to find these and remove them when I choose to un-install something. Or if it's just best to delete the folder from program files and use something like pocket mechanic to clean out the registry? Sorry for the length.