You have to use initflashfiles.txt to copy them all over to \Windows\other\other, but first you have to rename the duplicate names to something like same1.txt same2.txt so they can go directly into your OEM's folder. Then you copy them back in initflashfiles.txt like...
Directory("\Windows\Other"):-File("same.txt", "\Windows\same1.txt")
Directory("\Windows\Other\Other"):-File("same.txt", "\Windows\same2.txt")
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