[jmorton10]

I don't really understand your concern here.

If you do a full system BU with SPB to the card, when you restore that BU all the directories/file structures etc will be restored exactly the same as when you made the BU (it doesn't matter if you created them, the program did or whatever).

Even if your phone goes bad & has to be replaced, you can take the card with the SPB BU file on it, put it in the new phone & restore it - at the end of the restore the new phone will be identical to the old one in every way (you won't have to make any settings changes or re-install anything)

~John